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Software

  1. SCAN.UPC. Single-channel array normalization (SCAN) and Universal exPression Codes (UPC) - A Bioconductor package.
  2. ToolJig. A simple approach to building Common Workflow Language tool descriptions and workflows.
  3. TidyGEO. A Web application that enables researchers to wrangle datasets from Gene Expression Omnibus.
  4. CodeBuddy. A programming assignment management system for short-form exercises.
  5. ShinyLearner. A software framework for performing benchmarks of machine-learning classification algorithms. It has a Web interface to facilitate the process of designing benchmarks.
  6. Maptology. A Web application that enables researchers to annotate tabular datasets with biomedical-ontology terms.
  7. Gene Set Omic Analysis (GSOA). A tool for performing gene set analysis on multiple types of omic data.